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张新岩课题组

张新岩课题组

Zhang Xinyan’s Lab

  课题组长

  张新岩,研究员,博士生导师,农科院青年英才,深圳市“国家级领军人才”。长期从事植物分子遗传学和比较基因组学研究,研究领域涵盖植物激素、基因表达沉默及转座子生物学等,近年来以第一作者在 Science、Molecular Plant、Nucleic Acids Research等期刊发表学术论文多篇。

 

  工作经历

  2019.8-至今                  中国农业科学院(深圳)农业基因组研究所         研究员

  2015.1-2019.7              普渡大学                                                            博士后

 

  教育经历

  2007.9-2013.6             北京大学                          博士

  2004.9-2007.7            中国农业大学                    学士

 

  研究方向

  (一)作物功能基因组学。本课题组将利用基因组学、分子遗传学和生物化学等手段解析重要农艺性状尤其是作物高产性状的遗传基础,目前以二倍体马铃薯为材料,开展块茎和匍匐茎发育的生物学机制研究。

  (二)基因组生态学。真核生物基因组形成了庞大复杂、协调有序的生态系统。本课题组将以基因组微环境为对象,开展基因组功能解析和靶向型遗传元件的鉴定,多层次揭示基因组生态系统的组织规律。

 

  PI

  Xinyan Zhang, Principal Investigator. Xinyan’s research is at the interface between plant functional genetics and eukaryotic genomics. His lab’s current areas of focus include the genetic dissection of agronomically important traits in crops and the ecological mechanisms in eukaryotic genome functioning.

 

  Working Experience

  2019.8–Present   Agricultural Genomics Institute at Shenzhen-CAAS   Principal Investigator

  2015.1-2019.7    Purdue University                              Postdoctoral Fellow

 

  Education Experience

  2012.8-2018.8    Peking University                              Ph.D in plant biology                           

  2009.8–2012.6    China Agricultural University                    Bachelor 

 

  Research Interest

  (1) Crop functional genomics. We aim to dissect the genetic basis of agronomically important traits such as crop yield. The initial work in my lab will use diploid potato as a model system to identify genes that control yield-related traits.

  (2) Genome ecology. We are studying the organization and function of distinct niches in orderly arranged eukaryotic genomes with particular focus on characterizing precision-targeting genetic factors at those niches.

 

  Selected Publications

  1. Zhang X, Zhao M, McCarty D, Lisch D. Transposable elements employ distinct integration strategies with respect to transcriptional landscapes in eukaryotic genomes. Nucleic Acids Research. 2020, 48:6685–6698.

  2. Zhang X, Zhao M, Lisch D. Cost-effective profiling of Mutator transposon insertions in maize by next-generation sequencing (book chapter). Methods in Molecular Biology. 2020; (2072), 39-50.

  3. Zhang X, Guo H. mRNA decay in plants: both quantity and quality matter. Current Opinion in Plant Biology. 2017 Feb;35, 138-144.

  4. Zhang X, Zhu Y, Wu H, Guo H. Post-transcriptional gene silencing in plants: a double-edged sword. Science China Life Sciences. 2016 Mar;59 (3), 271-276.

  5. Zhang X, Zhu Y, Liu X, Xu Y, Zhu P, Shen Y, Yusi Ji, Wen X, Hong X, Zhang C, Zhao Q, Wang Y, Lu J, Guo H. Suppression of endogenous gene silencing by bidirectional cytoplasmic RNA decay in ArabidopsisScience. 2015 Apr;348 (6230), 120-123.

  6. Zhang X, Chen Y, Lin X, Hong X, Zhu Y, Li W, He W, An F, and Guo H. Adenine phosphoribosyl transferase 1 is a key enzyme catalyzing cytokinin conversion from nucleobases to nucleotides in Arabidopsis. Molecular Plant. 2013 Sep;6(5):1661-72.

 

  

  张新岩课题组更新于2021年2月

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