Weihua Pan
May
22, 2025
The team focuses on designing algorithms to solve key problems in genomics such as genome assembly, haplotype phasing and variant calling. We integrate cutting-edge genomics technologies such as PacBio HiFi, Oxford Nanopore Technology UL, Hi-C, BioNano and 10x Genomics with computational methods such as combinatorial optimization algorithms, graph theory, statistics and machine learning to develop novel, accurate and efficient algorithms to solve computational problems like polyploid genome assembly, haplotype reconstruction, telomere to telomere assembly and metagenome assembly. The developed algorithmic techniques are also applied to scientific research projects to assist in solving major scientific research problems.
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