刘永鑫课题组

	姓名：		刘永鑫
	职称：		研究员，博士生导师
	电话/传真：		13810163414
	电子邮件：		liuyongxin@caas.cn
	实验室主页：		https://www.x-mol.com/groups/liuyongxin
	研究方向：		宏基因组、微生物组、方法开发、功能挖掘、科学传播

 简历介绍：

刘永鑫，研究员，博士生导师。

2014年博士毕业于中国科学院大学生物信息学专业，之后在中国科学院遗传与发育生物学研究所工作，2022年10月加入中国农业科学院深圳农业基因组研究所担任课题组长，微生物组与营养健康团队首席。研究方向聚焦微生物组方法开发、功能挖掘和科学传播，在Nature Biotechnology、Nature Microbiology等期刊发表论文80余篇，被引29000余次，入选全球前2%科学家、国家级青年人才。主导开发了易扩增子(EasyAmplicon)、易宏基因组(EasyMetagenome)、培养组(Culturome)分析流程、数据分析网站(ImageGP1/2、EVenn、Wekemo) 和R包(amplicon、ggClusterNet1/2)等，目标是全面打造宏基因组领域方法学基础设施，推动微生物组学发展。主编《微生物组实验手册》专著，由300多位同行参与，共同打造本领域长期更新的中文百科全书。创办宏基因组公众号，18万+同行关注，分享原创文章3千余篇，累计阅读量超6千万，打造本领域最具影响力的科学传播平台。发起iMeta期刊，影响因子33.2，位列全球第65(前千分之三)和中国第5。兼职为Cell Host & Microbe、Nature Communications、Nucleic Acids Research、Microbiome等期刊审稿360余次。

 个人经历：

工作经历：

2022/10 - 至今     中国农业科学院深圳农业基因组研究所 研究员

2021/1 – 2022/9    中国科学院遗传与发育生物学研究所 高级工程师

2016/8 – 2020/12  中国科学院遗传与发育生物学研究所 工程师

2014/7 – 2016/7    中国科学院遗传与发育生物学研究所 博士后

教育经历：

2011/9 – 2014/6     中国科学院大学 博士研究生

2008/9 – 2011/6     东北农业大学 硕士研究生

2004/9 – 2008/6     东北农业大学 本科

个人经历

 团体研究方向：

团队成员：

刘永鑫	研究员	罗豪	24级博士生
白德凤	助理研究员	韩维	24级博士生
王瑶	助理研究员	徐锦波	25级博士生(内农大)
张天缘	博士后	杨海飞	23级硕士生(青岛农大)
万锈琳	博士后(凯普)	曾美尹	24级硕士
姚小芳	博士后	荀佳妮	24级硕士
朱志豪	博士后(广东医)	申子昂	25级硕士生(华南理工)
周远平	博士后(广东医)	尹春	26级直博生(复旦)
周扬	访问学者(油料所)	刘家汇	26级硕士生

研究内容：

刘永鑫实验室致力于微生物组学方法开发与功能挖掘（图1）。实验室将以宏基因组/微生物组方法开发（图2）为立足点，重点关注微生物三代测序和单细胞等新技术，解析菌群在农业、食品和人类营养健康中的作用（图3），并打造特色科学传播体系（图4）。

图1. 方法开发和功能挖掘推动微生物组学营养健康 

1) 方法开发：建立了微生物组高效易用的宏基因组数据分析和培养组方法；2) 功能挖掘：应用上述方法于作物菌群研究，揭示了水稻根系微生物组参与氮元素营养吸收的新理论，挖掘高效抗小麦赤霉病的生防菌并解析作用机制的新发现；解析中药多酚通过菌群代谢物缓解肠炎的新机制；发现阴道菌群与不孕症间关联的新现象等，多角度揭示菌群在人类和作物营养健康中的作用。3) 出版宣传：建立了18万+同行关注的宏基因组公众号，发起了微生物组实验手册专著，创办微生物学研究类期刊全球排名第一的iMeta期刊(IF 33.2)，填补我国本领域高水平出版和宣传缺口，目前已创办iMetaOmics、iMetaMed等子刊，目标是Cell系列国产替代。以上成果推动微生物组学从物种描述1.0时代，向营养健康2.0时代的加速转变。

图2. 微生物组学多层面分析方法开发。

1)  高通量培养组实现：低成本高通量纯菌、混菌鉴定；2)  扩增子和宏基因组流程实现菌群的物种和功能的精准高效解析；3)  功能基因挖掘方法为实验验证候选指明方向；4) 可重复多组学统计可视化和网络分析平台，实现大数据的高效探索。

图3. 微生物组挖掘农作物营养和健康功能菌。

A．营养：发现水稻NRT1.1B基因协同根系菌群参与氮营养的新理论。B. 健康(生防)：基于病原真菌微生物组分离筛选生防菌抗小麦赤霉病并解析其作用机制。C. 受邀撰写合成菌群解析因果综述。

图4. 微生物组领域中国特色科学传播平台。

 兼任iMeta期刊执行主编，目标实现Cell期刊国产替代。中) 主编《微生物组实验手册》，打造专业领域方法中文百科全书。下) 创办宏基因组公众号，建立知识分享平台。

研究进展 

2025年主要进展如下：正式发布了我国主导的宏基因组分析流程——易宏基因组EasyMetagenome (iMeta, 2025a)，支持三代PacBio/Nanopore长读扩增子分析流程——易扩增子EasyAmplicon 2 (Advanced Science, 2025)，数据分析可视化平台——微生物组统计可视化 MicrobiomeStatPlot (iMeta, 2025b)。受邀撰写三代宏基因组方法综述(Genomics Proteomics Bioinformatics, 2025)，植物去宿主富集微生物方法综述(Plant Biotechnology Journal, 2025)，测序技术检测病原体的前沿与应用(aBIOTECH, 2025)。课题组长和博后分别获国自然基金青B、青C项目，博士生和硕士生均在全所第一名成绩获国家奖学金。

代表论著：

代表论文：

2023

1. Tao Wen#, Guoqing Niu#, Tong Chen, Qirong Shen, Jun Yuan*, Yong-Xin Liu*. 2023. The best practice for microbiome analysis using R. Protein & Cell pwad024. https://doi.org/10.1093/procel/pwad024 (IF = 21.1, Q1)

2. Kai Peng#, Yong-xin Liu#, Xinran Sun, Qiaojun Wang, Pengcheng Du, Yunzeng Zhang, Mianzhi Wang, Zhiqiang Wang, Ruichao Li*. 2023. Long-read metagenomic sequencing reveals that high-copy small plasmids shape the highly prevalent antibiotic resistance genes in animal fecal microbiome. Science of the Total Environment 164585. https://doi.org/10.1016/j.scitotenv.2023.164585 (IF = 9.8, Q1)

3. Yong-Xin Liu#*, Lei Chen#, Tengfei Ma#, Xiaofang Li, Maosheng Zheng, Xin Zhou, Liang Chen, Xubo Qian, Jiao Xi, Hongye Lu, Huiluo Cao, Xiaoya Ma, Bian Bian, Pengfan Zhang, Jiqiu Wu, Ren-You Gan, Baolei Jia, Linyang Sun, Zhicheng Ju, Yunyun Gao*, Tao Wen*, Tong Chen*. 2023. EasyAmplicon: An easy-to-use, open-source, reproducible, and community-based pipeline for amplicon data analysis in microbiome research. iMeta 2: e83. https://doi.org/10.1002/imt2.83 (新刊，预计IF > 20, Q1)

4. Yunyun Gao, Danyi Li, Yong-Xin Liu*. 2023. Microbiome research outlook: past, present, and future. Protein & Cell pwad031. https://doi.org/10.1093/procel/pwad031 (IF = 21.1, Q1)

5. Yong-Xin Liu*, Chun-Lin Shi, Tengfei Ma, Wubin Ding, Danyi Li, Tong Chen*, Jingyuan Fu*, Shuang-Jiang Liu*. 2023. iMeta progress and acknowledgment of reviewers in 2022. iMeta 2: e89. https://doi.org/10.1002/imt2.89 (新刊，预计IF > 20, Q1)

6. Wen Luo, Yuanli Li, Ruiping Luo, Gehong Wei, Yongxin Liu*, Weimin Chen*. 2023. Dodder Parasitism Leads to the Enrichment of Pathogen Alternaria and Flavonoid Metabolites in Soybean Root. Agronomy 13: 1571. https://doi.org/10.3390/agronomy13061571 (IF = 3.7, Q1)

7. Penghao Sun#, Mengli Wang#, Yong‑Xin Liu, Luqi Li, Xuejun Chai, Wei Zheng, Shulin Chen1, Xiaoyan Zhu* and Shanting Zhao*. 2023.High-fat diet-disturbed gut microbiota-colonocyte interactions contribute to dysregulating peripheral tryptophan-kynurenine metabolism. Microbiome 11, 154, https://doi.org/10.1186/s40168-023-01606-x (IF = 15.5, Q1).

8. Yuanping Zhou#, Wenjiao Luo#, Maoxing Li, Qiong Wang, Yongxin Liu*, Huachun Guo*.2023. Summer Rice-Winter Potato Rotation Suppresses Various Soil-Borne Plant Fungal Pathogens. Agronomy 13, 2143 (IF = 3.7, Q1).

2022

1. Jiao Xi, Zanbo Ding, Tengqi Xu, Wenxing Qu, Yanzhi Xu, Yongqing Ma, Quanhong Xue, Yongxin Liu, Yanbing Lin. 2022. Maize Rotation Combined with Streptomyces rochei D74 to Eliminate Orobanche cumana Seed Bank in the Farmland. Agronomy 12: 3129. https://doi.org/10.3390/agronomy12123129 (IF = 3.949, Q1)

2021

1. Yong-Xin Liu#*, Yuan Qin#, Tong Chen#, Meiping Lu, Xubo Qian, Xiaoxuan Guo & Yang Bai*. (2021). A practical guide to amplicon and metagenomic analysis of microbiome data. Protein & Cell 12, 315-330, https://doi.org/10.1007/s13238-020-00724-8 (IF = 15.328, Highly Cited)

2. Yong-Xin Liu, Yuan Qin & Yang Bai*. (2019). Reductionist synthetic community approaches in root microbiome research. Current Opinion in Microbiology 49, 97-102, https://doi.org/10.1016/j.mib.2019.10.010 (IF = 7.584)

3. Wenjun Li#, Likun Wang#, Xiaofang Li*, Xin Zheng, Michael F. Cohen, Yong-Xin Liu*. 2022. Sequence-based Functional Metagenomics Reveals Novel Natural Diversity of Functioning CopA in Environmental Microbiomes. Genomics Proteomics Bioinformatics https://doi.org/10.1016/j.gpb.2022.08.006 (IF = 6.409)

4. Jingying Zhang#, Yong-Xin Liu#, Na Zhang#, Bin Hu#, Tao Jin#, Haoran Xu, Yuan Qin, Pengxu Yan, Xiaoning Zhang, Xiaoxuan Guo, Jing Hui, Shouyun Cao, Xin Wang, Chao Wang, Hui Wang, Baoyuan Qu, Guangyi Fan, Lixing Yuan, Ruben Garrido-Oter, Chengcai Chu* & Yang Bai*. (2019). NRT1.1B is associated with root microbiota composition and nitrogen use in field-grown rice. Nature Biotechnology 37, 676-684, https://doi.org/10.1038/s41587-019-0104-4 (IF = 68.164, Highly Cited, Hot Paper, Cover Story)

5. Sunde Xu#, Yong-Xin Liu#, Tomislav Cernava#, Hongkai Wang, Shugeng Cao, Yaqi Zhou, Gabriele Berg, Tie Xia, Xing-Xing Shen, Ziyue Wen, Chunshun Li, Baoyuan Qu, Hefei Ruan, Yunrong Chai, Xueping Zhou, Zhonghua Ma, Yan Shi, Yunlong Yu, Yang Bai*, Yun Chen*. (2022). Bacteria within the fungal fruiting-body microbiome reduce fungal infections in cereal by disrupting lipid rafts. Nature Microbiology 7, 831-843, https://doi.org/10.1038/s41564-022-01131-x (IF = 30.964)

6. Jingying Zhang#, Yong-Xin Liu#, Xiaoxuan Guo, Yuan Qin, Ruben Garrido-Oter*, Paul Schulze-Lefert*, Yang Bai*. (2021). High-throughput cultivation and identification of bacteria from the plant root microbiota. Nature Protocols 16, 988-1012, https://doi.org/10.1038/s41596-020-00444-7 (IF = 17.021, Highly Cited,)

7. Yong-Xin Liu, Meng Wang & Xiu-Jie Wang*. (2014). Endogenous small RNA clusters in plants. Genomics Proteomics Bioinformatics 12, 64-71, https://doi.org/10.1016/j.gpb.2014.04.003 (IF = 6.409)

8. Xu-Bo Qian#, Tong Chen#, Yi-Ping Xu, Lei Chen, Fu-Xiang Sun, Mei-Ping Lu* & Yong-Xin Liu. (2020). A guide to human microbiome research: study design, sample collection, and bioinformatics analysis. Chinese Medical Journal, https://doi.org/10.1097/cm9.0000000000000871 (IF = 6.151)

9. Jingying Zhang#, Na Zhang#, Yong-Xin Liu#, Xiaoning Zhang, Bin Hu, Yuan Qin, Haoran Xu, Hui Wang, Xiaoxuan Guo, Jingmei Qian, Wei Wang, Pengfan Zhang, Tao Jin*, Chengcai Chu* & Yang Bai*. (2018). Root microbiota shift in rice correlates with resident time in the field and developmental stage. Science China Life Sciences 61, 613-621, https://doi.org/10.1007/s11427-018-9284-4 (IF = 10.42, Cover Story)

10. Tong Chen, Haiyan Zhang, Yu Liu, Yong-Xin Liu*, Luqi Huang* (2021). EVenn: Easy to create repeatable and editable Venn diagrams and Venn networks online. Journal of Genetics and Genomics, https://doi.org/10.1016/j.jgg.2021.07.007 (IF = 5.733)

11. Tao Wen#, Penghao Xie#, Shengdie Yang, Guoqing Niu, Xiaoyu Liu, Zhexu Ding, Chao Xue, Yong-Xin Liu*, Qirong Shen, Jun Yuan*. (2022). ggClusterNet: An R package for microbiome network analysis and modularity-based multiple network layouts. iMeta 1: e32. https://doi.org/10.1002/imt2.32

12. Tong Chen, Yong-Xin Liu*, Luqi Huang*. (2022). ImageGP: An easy-to-use data visualization web server for scientific researchers. iMeta 1: e5. https://doi.org/10.1002/imt2.5

13. Yong-Xin Liu*, Tong Chen*, Danyi Li, Jingyuan Fu*, Shuang-Jiang Liu*. (2022). iMeta: Integrated meta-omics for biology and environments. iMeta 1: e15. https://doi.org/10.1002/imt2.15

14. Xubo Qian#, Yong-Xin Liu#, Xiaohong Ye, Wenjie Zheng, Shaoxia Lv, Miaojun Mo, Jinjing Lin, Wenqin Wang, Weihan Wang, Xianning Zhang & Meiping Lu*. (2020). Gut microbiota in children with juvenile idiopathic arthritis: characteristics, biomarker identification, and usefulness in clinical prediction. BMC Genomics 21, 286, https://doi.org/10.1186/s12864-020-6703-0 (IF = 4.560)

15. Yong-Xin Liu#, Wei Chang#, Ying-peng Han, Quan Zou, Mao-zu Guo & Wen-bin Li*. (2011). In silico detection of novel microRNAs genes in soybean genome. Agricultural Sciences in China 10, 1336-1345, https://doi.org/10.1016/S1671-2927(11)60126-0 (IF = 4.384)

16. Yong-Xin Liu, Ying-peng Han, Wei Chang, Quan Zou, Mao-zu Guo & Wen-bin Li*. (2010). Genomic analysis of microRNA promoters and their cis-acting elements in soybean. Agricultural Sciences in China 9, 1561-1570, https://doi.org/10.1016/S1671-2927(09)60252-2 (IF = 4.384)

17. Jing Li#, Yong-Xin Liu#, Ying-peng Han, Yong-guang Li, Mao-zu Guo, Wen-bin Li*. (2013). MicroRNA primary transcripts and promoter elements analysis in soybean (Glycine max L. Merril.). Journal of Integrative Agriculture 12, 1522-1529, https://doi.org/10.1016/S2095-3119(13)60500-6 (IF = 4.384)

18. 刘永鑫, 秦媛, 郭晓璇 & 白洋*. (2019). 微生物组数据分析方法与应用. 遗传 41, 845-826, https://doi.org/10.16288/j.yczz.19-222

19. Ancheng C. Huang#, Ting Jiang#, Yong-Xin Liu, Yue-Chen Bai, James Reed, Baoyuan Qu, Alain Goossens, Hans-Wilhelm Nützmann, Yang Bai* & Anne Osbourn*. (2019). A specialized metabolic network selectively modulates Arabidopsis root microbiota. Science 364, eaau6389, https://doi.org/10.1126/science.aau6389 (IF = 63.798, Highly Cited)

20. Evan Bolyen#, Jai Ram Rideout#, Matthew R. Dillon#, Nicholas A. Bokulich#, Christian C. Abnet, Gabriel A. Al-Ghalith, Harriet Alexander, Eric J. Alm, Manimozhiyan Arumugam, Francesco Asnicar, Yang Bai, Jordan E. Bisanz, Kyle Bittinger, Asker Brejnrod, Colin J. Brislawn, C. Titus Brown, Benjamin J. Callahan, Andrés Mauricio Caraballo-Rodríguez, John Chase, Emily K. Cope, Ricardo Da Silva, Christian Diener, Pieter C. Dorrestein, Gavin M. Douglas, Daniel M. Durall, Claire Duvallet, Christian F. Edwardson, Madeleine Ernst, Mehrbod Estaki, Jennifer Fouquier, Julia M. Gauglitz, Sean M. Gibbons, Deanna L. Gibson, Antonio Gonzalez, Kestrel Gorlick, Jiarong Guo, Benjamin Hillmann, Susan Holmes, Hannes Holste, Curtis Huttenhower, Gavin A. Huttley, Stefan Janssen, Alan K. Jarmusch, Lingjing Jiang, Benjamin D. Kaehler, Kyo Bin Kang, Christopher R. Keefe, Paul Keim, Scott T. Kelley, Dan Knights, Irina Koester, Tomasz Kosciolek, Jorden Kreps, Morgan G. I. Langille, Joslynn Lee, Ruth Ley, Yong-Xin Liu, Erikka Loftfield, Catherine Lozupone, Massoud Maher, Clarisse Marotz, Bryan D. Martin, Daniel McDonald, Lauren J. McIver, Alexey V. Melnik, Jessica L. Metcalf, Sydney C. Morgan, Jamie T. Morton, Ahmad Turan Naimey, Jose A. Navas-Molina, Louis Felix Nothias, Stephanie B. Orchanian, Talima Pearson, Samuel L. Peoples, Daniel Petras, Mary Lai Preuss, Elmar Pruesse, Lasse Buur Rasmussen, Adam Rivers, Michael S. Robeson, Patrick Rosenthal, Nicola Segata, Michael Shaffer, Arron Shiffer, Rashmi Sinha, Se Jin Song, John R. Spear, Austin D. Swafford, Luke R. Thompson, Pedro J. Torres, Pauline Trinh, Anupriya Tripathi, Peter J. Turnbaugh, Sabah Ul-Hasan, Justin J. J. van der Hooft, Fernando Vargas, Yoshiki Vázquez-Baeza, Emily Vogtmann, Max von Hippel, William Walters, Yunhu Wan, Mingxun Wang, Jonathan Warren, Kyle C. Weber, Charles H. D. Williamson, Amy D. Willis, Zhenjiang Zech Xu, Jesse R. Zaneveld, Yilong Zhang, Qiyun Zhu, Rob Knight & J. Gregory Caporaso*. (2019). Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2. Nature Biotechnology 37, 852-857, https://doi.org/10.1038/s41587-019-0209-9 (IF = 68.164)

21. Wei Wang#, Jing Yang#, Jian Zhang, Yong-Xin Liu, Caiping Tian, Baoyuan Qu, Chulei Gao, Peiyong Xin, Shujing Cheng, Wenjing Zhang, Pei Miao, Lei Li, Xiaojuan Zhang, Jinfang Chu, Jianru Zuo, Jiayang Li, Yang Bai, Xiaoguang Lei* & Jian-Min Zhou*. (2020). An Arabidopsis secondary metabolite directly targets expression of the bacterial type III secretion system to inhibit bacterial virulence. Cell Host & Microbe 27, 601-613.e607, https://doi.org/10.1016/j.chom.2020.03.004 (IF = 31.316)

22. Leli Wang, Qihang Liu, Yuwei Chen, Xinlei Zheng, Chuni Wang, Yining Qi, Yachao Dong, Yue Xiao, Cang Chen, Taohong Chen, Qiuyun Huang, Zongzhao Zhai, Cimin Long, Huansheng Yang, Jianzhong Li, Lei Wang, Gaihua Zhang, Peng Liao, Yong-Xin Liu, Peng Huang, Jialu Huang, Qiye Wang, Huanhuan Chu, Jia Yin & Yulong Yin. (2022). Antioxidant potential of Pediococcus pentosaceus strains from the sow milk bacterial collection in weaned piglets. Microbiome 10: 83, https://doi.org/s40168-022-01278-z (IF = 16.837)

23. Wei Wang#, Bin Hu#, Dingyang Yuan, Yongqiang Liu, Ronghui Che, Yingchun Hu, Shujun Ou, Zhihua Zhang, Hongru Wang, Hua Li, Zhimin Jiang, Zhengli Zhang, Xiaokai Gao, Yahong Qiu, Xiangbing Meng, Yong-Xin Liu, Yang Bai, Yan Liang, Yi-Qin Wang, Lianhe Zhang, Legong Li, Sodmergen Sodmergen, Hai-Chun Jing, Jiayang Li & Chengcai Chu*. (2018). Expression of the nitrate transporter gene OsNRT1.1A/OsNPF6.3 confers high yield and early maturation in rice. The Plant Cell 30, 638-651, https://doi.org/10.1105/tpc.17.00809 (IF = 12.085, Highly Cited)

24. Maosheng Zheng, Nan Zhou, Shufeng Liu, Chenyuan Dang, Yong-Xin Liu, Shishi He, Yijun Zhao, Wen Liu & Xiangke Wang*. (2019). N2O and NO emission from a biological aerated filter treating coking wastewater: Main source and microbial community. Journal of Cleaner Production 213, 365-374, https://doi.org/10.1016/j.jclepro.2018.12.182 (IF = 11.072)

25. Qingwen Chen#, Ting Jiang#, Yong-Xin Liu, Haili Liu, Tao Zhao, Zhixi Liu, Xiaochao Gan, Asis Hallab, Xuemei Wang, Juan He, Yihua Ma, Fengxia Zhang, Tao Jin, M.Eric Schranz, Yong Wang, Yang Bai* & Guodong Wang*. (2019). Recently duplicated sesterterpene (C25) gene clusters in Arabidopsis thaliana modulate root microbiota. Science China Life Sciences 62, 947-958, https://doi.org/10.1007/s11427-019-9521-2 (IF = 10.42)

26. Handong Su#, Yalin Liu#, Yong‐Xin Liu, Zhenling Lv, Hongyao Li, Shaojun Xie, Zhi Gao, Junling Pang, Xiu‐Jie Wang, Jinsheng Lai & Fangpu Han*. (2016). Dynamic chromatin changes associated with de novo centromere formation in maize euchromatin. Plant Journal 1, 1-17, https://doi.org/10.1111/tpj.13305 (IF = 7.091)

27. Jiao Xi#, Beilei Lei#, Yong-Xin Liu, Zanbo Ding, Jiaxi Liu, Tengqi Xu, Lijun Hou, Siqi Han, Xun Qian, Yongqing Ma, Quanhong Xue, Jinming Gao, Jie Gu*, James M. Tiedje*, Yanbing Lin*. (2022). Microbial community roles and chemical mechanisms in the parasitic development of Orobanche cumana. iMeta 1: e31. https://doi.org/10.1002/imt2.31

28. Xin Zheng#, Likun Wang#, Linhao You, Yong-Xin Liu, Michael Cohen, Siyu Tian, Wenjun Li, Xiaofang Li. (2022). Dietary licorice enhances in vivo cadmium detoxification and modulates gut microbial metabolism in mice. iMeta 1: e7. https://doi.org/10.1002/imt2.7

29. Rong-Min Zhang, Jian Sun, Ruan-Yang Sun, Min-Ge Wang, Chao-Yue Cui, Liang-Xing Fang, Mei-Na Liao, Xiao-Qing Lu, Yong-Xin Liu, Xiao-Ping Liao, Ya-Hong Liu & Wei-Hua Chen. (2021). Source Tracking and Global Distribution of the Tigecycline Non-Susceptible tet(X). Microbiology Spectrum 9: e01164-01121. https://doi.org/10.1128/Spectrum.01164-21 (IF = 9.043)

30. Maosheng Zheng, Shishi He, Yueqi Feng, Mingyuan Wang, Yong-Xin Liu, Chenyuan Dang, Jiawen Wang*. (2021). Active ammonia-oxidizing bacteria and archaea in wastewater treatment systems. Journal of Environmental Sciences 102 273-282 https://doi.org/10.1016/j.jes.2020.09.039 (IF = 6.796)

31. Zhiyao Lv, Rui Dai, Haoran Xu, Yong‐Xin Liu, Bo Bai, Ying Meng, Haiyan Li, Xiaofeng Cao, Yang Bai, Xianwei Song, Jingying Zhang. (2021). The rice histone methylation regulates hub species of the root microbiota. Journal of Genetics and Genomics, https://doi.org/10.1016/j.jgg.2021.06.005  (IF = 5.733)

32. Jun Xu#, Jie-Ni Zhang#, Bo-Hui Sun, Qing Liu, Juan Ma, Qian Zhang, Yong-Xin Liu, Ning Chen* & Feng Chen*. (2021). The role of genotype and diet in shaping gut microbiome in a genetic Vitamin A deficient mouse model. Journal of Genetics and Genomics, https://doi.org/10.1016/j.jgg.2021.08.015 (IF = 5.733)

“#” represents the co-first author, “*” represents the corresponding author, IF is the abbreviation of impact factor of Journal Citation Reports.

刘永鑫课题组更新于2023年9月